Amplicon library from HSD00-20a-288-S2C011-0400 - SRA

SRX20015253: Amplicon library from HSD00-20a-288-S2C011-0400
1 ILLUMINA (Illumina MiSeq) run: 59,491 spots, 28.5M bases, 13.9Mb downloads

Design: 16S rRNA gene amplicons using the Earth Microbiome Project (EMP) protocol and primers for the V4 region. 5 PRIME HotMasterMix was used for amplification. AMPure XP beads were used to purify PCR products. Sequenced with the MiSeq 600 cycle Version 3 sequencing kit.

Submitted by: SCOPE

Study: HOT ALOHA metagenomic time and depth series

PRJNA352737 • SRP092796 • All experiments • All runs

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A time-resolved deep metagenomic survey of bacterioplankton from the ocean's surface to a depth of 1,000 m in the North Pacific Subtropical Gyre at Station ALOHA, collected from Hawaii Ocean Time-series (HOT) cruises from August 2010 through November 2017.

Sample: SCOPE HOT time series metagenomic sample HSD00-20a-288-S2C011-0400

SAMN25282781 • SRS17356757 • All experiments • All runs

Organism: marine plankton metagenome

Library:

Name: HSD00-20a-288-S2C011-0400_amplicon

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 59,491 spots, 28.5M bases, 13.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR24218689	59,491	28.5M	13.9Mb	2023-11-14

ID:: 27412963

SRA

Sequence Read Archive

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